2025 · ICML 2025 — DataWorld: Unifying Data Curation Frameworks Across Domains workshop · Preprint

Beyond Atomic Geometry Representations in Materials Science: A Human-in-the-Loop Multimodal Framework

Can Polat , Hasan Kurban , Erchin Serpedin , Mustafa Kurban
TL;DR

A human-in-the-loop framework for richer atomic-geometry representations in materials science — moving past the standard graph-of-atoms abstraction.

Abstract
Most materials science datasets are limited to atomic geometries (e.g., XYZ files), restricting their utility for multimodal learning and comprehensive data-centric analysis. These constraints have historically impeded the adoption of advanced machine learning techniques in the field. This work introduces MultiCrystalSpectrumSet (MCS-Set), a curated framework that expands materials datasets by integrating atomic structures with 2D projections and structured textual annotations, including lattice parameters and coordination metrics. MCS-Set enables two key tasks: (1) multimodal property and summary prediction, and (2) constrained crystal generation with partial cluster supervision. Leveraging a human-in-the-loop pipeline, MCS-Set combines domain expertise with standardized descriptors for high-quality annotation. Evaluations using state-of-the-art language and vision-language models reveal substantial modality-specific performance gaps and highlight the importance of annotation quality for generalization. MCS-Set offers a foundation for benchmarking multimodal models, advancing annotation practices, and promoting accessible, versatile materials science datasets. The dataset and implementations are available at https://github.com/KurbanIntelligenceLab/MultiCrystalSpectrumSet.
Cite
@misc{polat2025beyond,
  title = {Beyond Atomic Geometry Representations in Materials Science: A Human-in-the-Loop Multimodal Framework},
  author = {Can Polat and Hasan Kurban and Erchin Serpedin and Mustafa Kurban},
  year = 2025,
  journal = {ICML 2025 — DataWorld: Unifying Data Curation Frameworks Across Domains workshop},
  doi = {10.48550/arxiv.2506.00302},
  url = {https://arxiv.org/pdf/2506.00302},
}